1. SGSeq::gr
    Example genomic region of interest
    rda| rds
    GRanges
  2. SGSeq::sgf_ann
    Example splice graph features (annotation-based)
    rda| rds
    SGFeatures
  3. SGSeq::sgf_pred
    Example splice graph features (predicted)
    rda| rds
    SGFeatures
  4. SGSeq::sgfc_ann
    Example splice graph feature counts (annotation-based)
    rda| rds
    SGFeatureCounts
  5. SGSeq::sgfc_pred
    Example splice graph feature counts (predicted)
    rda| rds
    SGFeatureCounts
  6. SGSeq::sgv_ann
    Example splice variants (annotation-based)
    rda| rds
    SGVariants
  7. SGSeq::sgv_pred
    Example splice variants (predicted)
    rda| rds
    SGVariants
  8. SGSeq::sgvc_ann
    Example splice variant counts (annotated)
    rda| rds
    SGVariantCounts
  9. SGSeq::sgvc_ann_from_bam
    Example splice variant counts (annotated) from BAM files
    rda| rds
    SGVariantCounts
  10. SGSeq::sgvc_pred
    Example splice variant counts (predicted)
    rda| rds
    SGVariantCounts
  11. SGSeq::sgvc_pred_from_bam
    Example splice variant counts (predicted) from BAM files
    rda| rds
    SGVariantCounts
  12. SGSeq::si
    Example sample information
    csv| xlsx| json| ndjson| rda| rds
    data.frame|8 x 6
  13. SGSeq::tx
    Example transcripts
    rda| rds
    CompressedGRangesList
  14. SGSeq::txf_ann
    Example transcript features (annotation-based)
    rda| rds
    TxFeatures
  15. SGSeq::txf_pred
    Example transcript features (predicted)
    rda| rds
    TxFeatures